Package: CMapViz 0.1.0

Raphaël Bonnet

CMapViz: Representation Tool For Output Of Connectivity Map (CMap) Analysis

Automatically displays graphical visualization for exported data table (permutated results) from Connectivity Map (CMap) (2006) <doi:10.1126/science.1132939>. It allows the representation of the statistics (p-value and enrichment) according to each cell lines in the form of a bubble plot.

Authors:Raphaël Bonnet [aut, cre], Jean-François Peyron[aut,ths]

CMapViz_0.1.0.tar.gz
CMapViz_0.1.0.zip(r-4.5)CMapViz_0.1.0.zip(r-4.4)CMapViz_0.1.0.zip(r-4.3)
CMapViz_0.1.0.tgz(r-4.4-any)CMapViz_0.1.0.tgz(r-4.3-any)
CMapViz_0.1.0.tar.gz(r-4.5-noble)CMapViz_0.1.0.tar.gz(r-4.4-noble)
CMapViz_0.1.0.tgz(r-4.4-emscripten)CMapViz_0.1.0.tgz(r-4.3-emscripten)
CMapViz.pdf |CMapViz.html✨
CMapViz/json (API)

Peer review:

Bug tracker:https://github.com/peyronlab/cmapviz/issues

On CRAN:

1 exports 0.62 score 44 dependencies 171 downloads

Last updated 5 years agofrom:7953886a5d. Checks:OK: 7. Indexed: yes.

Exports:bubble_plot

Dependencies:cellrangerclicolorspacecpp11crayondplyrfansifarvergenericsggplot2gluegtablehmsisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrprettyunitsprogressR6RColorBrewerRcppreadxlrematchreshape2rlangscalesstringistringrtibbletidyselectutf8vctrsviridisLitewithr