Package: CMapViz 0.1.0

Raphaël Bonnet
CMapViz: Representation Tool For Output Of Connectivity Map (CMap) Analysis
Automatically displays graphical visualization for exported data table (permutated results) from Connectivity Map (CMap) (2006) <doi:10.1126/science.1132939>. It allows the representation of the statistics (p-value and enrichment) according to each cell lines in the form of a bubble plot.
Authors:
CMapViz_0.1.0.tar.gz
CMapViz_0.1.0.zip(r-4.7)CMapViz_0.1.0.zip(r-4.6)CMapViz_0.1.0.zip(r-4.5)
CMapViz_0.1.0.tgz(r-4.6-any)CMapViz_0.1.0.tgz(r-4.5-any)
CMapViz_0.1.0.tar.gz(r-4.7-any)CMapViz_0.1.0.tar.gz(r-4.6-any)
CMapViz_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
CMapViz/json (API)
| # Install 'CMapViz' in R: |
| install.packages('CMapViz', repos = c('https://peyronlab.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/peyronlab/cmapviz/issues
Last updated from:7953886a5d. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 128 | ||
| source / vignettes | OK | 151 | ||
| linux-release-x86_64 | OK | 130 | ||
| macos-release-arm64 | OK | 179 | ||
| macos-oldrel-arm64 | OK | 173 | ||
| windows-devel | OK | 83 | ||
| windows-release | OK | 82 | ||
| windows-oldrel | OK | 78 | ||
| wasm-release | OK | 91 |
Exports:bubble_plot
Dependencies:cellrangerclicpp11crayondplyrfarvergenericsggplot2gluegtablehmsisobandlabelinglifecyclemagrittrpillarpkgconfigplyrprettyunitsprogressR6RColorBrewerRcppreadxlrematchreshape2rlangS7scalesstringistringrtibbletidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Bubble plot of CMap output table | bubble_plot |