Package: CMapViz 0.1.0

Raphaël Bonnet

CMapViz: Representation Tool For Output Of Connectivity Map (CMap) Analysis

Automatically displays graphical visualization for exported data table (permutated results) from Connectivity Map (CMap) (2006) <doi:10.1126/science.1132939>. It allows the representation of the statistics (p-value and enrichment) according to each cell lines in the form of a bubble plot.

Authors:Raphaël Bonnet [aut, cre], Jean-François Peyron[aut,ths]

CMapViz_0.1.0.tar.gz
CMapViz_0.1.0.zip(r-4.7)CMapViz_0.1.0.zip(r-4.6)CMapViz_0.1.0.zip(r-4.5)
CMapViz_0.1.0.tgz(r-4.6-any)CMapViz_0.1.0.tgz(r-4.5-any)
CMapViz_0.1.0.tar.gz(r-4.7-any)CMapViz_0.1.0.tar.gz(r-4.6-any)
CMapViz_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
CMapViz/json (API)

# Install 'CMapViz' in R:
install.packages('CMapViz', repos = c('https://peyronlab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/peyronlab/cmapviz/issues

On CRAN:

Conda:

2.70 score 168 downloads 1 exports 37 dependencies

Last updated from:7953886a5d. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK128
source / vignettesOK151
linux-release-x86_64OK130
macos-release-arm64OK179
macos-oldrel-arm64OK173
windows-develOK83
windows-releaseOK82
windows-oldrelOK78
wasm-releaseOK91

Exports:bubble_plot

Dependencies:cellrangerclicpp11crayondplyrfarvergenericsggplot2gluegtablehmsisobandlabelinglifecyclemagrittrpillarpkgconfigplyrprettyunitsprogressR6RColorBrewerRcppreadxlrematchreshape2rlangS7scalesstringistringrtibbletidyselectutf8vctrsviridisLitewithr