Package: CMapViz 0.1.0
Raphaël Bonnet
CMapViz: Representation Tool For Output Of Connectivity Map (CMap) Analysis
Automatically displays graphical visualization for exported data table (permutated results) from Connectivity Map (CMap) (2006) <doi:10.1126/science.1132939>. It allows the representation of the statistics (p-value and enrichment) according to each cell lines in the form of a bubble plot.
Authors:
CMapViz_0.1.0.tar.gz
CMapViz_0.1.0.zip(r-4.5)CMapViz_0.1.0.zip(r-4.4)CMapViz_0.1.0.zip(r-4.3)
CMapViz_0.1.0.tgz(r-4.4-any)CMapViz_0.1.0.tgz(r-4.3-any)
CMapViz_0.1.0.tar.gz(r-4.5-noble)CMapViz_0.1.0.tar.gz(r-4.4-noble)
CMapViz_0.1.0.tgz(r-4.4-emscripten)CMapViz_0.1.0.tgz(r-4.3-emscripten)
CMapViz.pdf |CMapViz.html✨
CMapViz/json (API)
# Install 'CMapViz' in R: |
install.packages('CMapViz', repos = c('https://peyronlab.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/peyronlab/cmapviz/issues
Last updated 5 years agofrom:7953886a5d. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 03 2024 |
R-4.5-win | OK | Nov 03 2024 |
R-4.5-linux | OK | Nov 03 2024 |
R-4.4-win | OK | Nov 03 2024 |
R-4.4-mac | OK | Nov 03 2024 |
R-4.3-win | OK | Nov 03 2024 |
R-4.3-mac | OK | Nov 03 2024 |
Exports:bubble_plot
Dependencies:cellrangerclicolorspacecpp11crayondplyrfansifarvergenericsggplot2gluegtablehmsisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrprettyunitsprogressR6RColorBrewerRcppreadxlrematchreshape2rlangscalesstringistringrtibbletidyselectutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Bubble plot of CMap output table | bubble_plot |