ScriptMapR - R Script Visualization in Cytoscape
Displays the content of a R script into the 'Cytoscape' network-visualization app <https://cytoscape.org/>.
Last updated 4 years ago
3.48 score 6 stars 215 downloadsCMapViz - Representation Tool For Output Of Connectivity Map (CMap) Analysis
Automatically displays graphical visualization for exported data table (permutated results) from Connectivity Map (CMap) (2006) <doi:10.1126/science.1132939>. It allows the representation of the statistics (p-value and enrichment) according to each cell lines in the form of a bubble plot.
Last updated 5 years ago
2.70 score 181 downloadsaliases2entrez - Converts Human gene symbols to entrez IDs
Queries multiple resources authors HGNC (2019) <https://www.genenames.org>, authors limma (2015) <doi:10.1093/nar/gkv007> to find the correspondence between evolving nomenclature of human gene symbols, aliases, previous symbols or synonyms with stable, curated gene entrezID from NCBI database. This allows fast, accurate and up-to-date correspondence between human gene expression datasets from various date and platform (e.g: gene symbol: BRCA1 - ID: 672).
Last updated 4 years ago
2.00 score 1 stars 10 scripts 364 downloads